Szczegóły publikacji

Opis bibliograficzny

Glioma classification using multimodal radiology and histology data / Azam Hamidinekoo, Tomasz PIĘCIAK, Maryam Afzali, Otar Akanyeti, Yinyin Yuan // W: Brainlesion: glioma, multiple sclerosis, stroke and traumatic brain injuries : 6th international workshop, BrainLes 2020 : held in conjunction with MICCAI 2020 : Lima, Peru, October 4, 2020 : selected papers, Pt. 2 / eds. Alessandro Crimi, Spyridon Bakas. — Cham : Springer Nature Switzerland AG, cop. 2021. — (Lecture Notes in Computer Science ; ISSN 0302-9743 ; LNCS 12659. Image Processing, Computer Vision, Pattern Recognition, and Graphics). — ISBN: 978-3-030-72086-5; e-ISBN: 978-3-030-72087-2. — S. 508–518. — Bibliogr. s. 517-518, Abstr. — T. Pięciak - dod. afiliacja: Universidad de Valladolid, Spain


Autorzy (5)


Słowa kluczowe

multi-modal MRIglioma classificationdigital pathology

Dane bibliometryczne

ID BaDAP133237
Data dodania do BaDAP2021-04-01
DOI10.1007/978-3-030-72087-2_45
Rok publikacji2021
Typ publikacjimateriały konferencyjne (aut.)
Otwarty dostęptak
WydawcaSpringer
Czasopismo/seriaLecture Notes in Computer Science

Abstract

Gliomas are brain tumours with a high mortality rate. There are various grades and sub-types of this tumour, and the treatment procedure varies accordingly. Clinicians and oncologists diagnose and categorise these tumours based on visual inspection of radiology and histology data. However, this process can be time-consuming and subjective. The computer-assisted methods can help clinicians to make better and faster decisions. In this paper, we propose a pipeline for automatic classification of gliomas into three sub-types: oligodendroglioma, astrocytoma, and glioblastoma, using both radiology and histopathology images. The proposed approach implements distinct classification models for radiographic and histologic modalities and combines them through an ensemble method. The classification algorithm initially carries out tile-level (for histology) and slice-level (for radiology) classification via a deep learning method, then tile/slice-level latent features are combined for a whole-slide and whole-volume sub-type prediction. The classification algorithm was evaluated using the data set provided in the CPM-RadPath 2020 challenge. The proposed pipeline achieved the F1-Score of 0.886, Cohen’s Kappa score of 0.811 and Balance accuracy of 0.860. The ability of the proposed model for end-to-end learning of diverse features enables it to give a comparable prediction of glioma tumour sub-types.

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Unsupervised learning-based nonrigid registration of high resolution histology images / Marek WODZIŃSKI, Henning Müller // W: Machine Learning in Medical Imaging : 11th international workshop, MLMI 2020 : held in conjunction with MICCAI 2020 : Lima, Peru, October 4, 2020 : proceedings / eds. Mingxia Liu, [et al.]. — Cham : Springer Nature Switzerland, cop. 2020. — (Lecture Notes in Computer Science ; ISSN 0302-9743 ; LNCS 12436. Image Processing, Computer Vision, Pattern Recognition, and Graphics). — ISBN: 978-3-030-59860-0; e-ISBN: 978-3-030-59861-7. — S. 484–493. — Bibliogr., Abstr. — Publikacja dostępna online od: 2020-09-29
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Unsupervised method for intra-patient registration of brain magnetic resonance images based on objective function weighting by inverse consistency: contribution to the BraTS-Reg challenge / Marek WODZIŃSKI, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller // W: Brainlesion: glioma, multiple sclerosis, stroke and traumatic brain injuries : 8th international workshop, BrainLes 2022 : held in conjunction with MICCAI 2022 : Singapore, September 18, 2022 : revised selected papers / eds. Spyridon Bakas [et al.]. — Cham : Springer Nature Switzerland, cop. 2023. — (Lecture Notes in Computer Science ; ISSN 0302-9743 ; LNCS 13769). — ISBN: 978-3-031-33841-0; e-ISBN: 978-3-031-33842-7. — S. 241–251. — Bibliogr., Abstr. — Publikacja dostępna online od: 2023-07-18. — M. Wodziński, A. Jurgas - dod. afiliacja: University of Applied Sciences Western Switzerland Information Systems Institute, Sierre, Switzerland